Tutorial · GST · Understand GST

03 · DPIIT startups and GST — what recognition does and does not do

Startup India is real. It is not a GST holiday. Here is what founders mix up, and how to set Phyntara if you are DPIIT-recognised. About 12 min. As of August 2026.

This tutorial explains GST the way a new founder or accounts clerk needs it, and how the same work is done in Phyntara. It is teaching, not a legal opinion. Thresholds, due dates, and late fees change when the GST Council notifies them. Your CA files. Confirm the live rule on gst.gov.in before you act on a rupee.

DPIIT is the Department for Promotion of Industry and Internal Trade. Recognition under the Startup India scheme is a certificate for an eligible private limited company, LLP, or registered partnership that is working on innovation / improvement of products, services, or processes, and that meets age and turnover tests published on the Startup India portal.

What DPIIT is actually for (mostly not GST)

  • Income-tax: possible deduction under section 80-IAC for eligible startups (conditions, Inter-Ministerial Board, three years in a ten-year window). That is corporation tax, not GST.
  • Angel-tax: DPIIT-recognised startups that file the required declaration have historically been outside the old 56(2)(viib) net on specified share issues. Again, income-tax.
  • Self-certification under specified labour and environment laws for a period.
  • IPR fast-track / reduced fees in notified schemes.
  • Public procurement: exemption from prior experience / turnover in many GeM and government tenders (read the bid).
  • Banking and Fund of Funds access are policy, not a GST exemption list.

State GST reimbursements — not a Central exemption

Some state industrial / startup policies reimburse a part of SGST actually paid and deposited, for a few years, if you manufacture or operate in that state and file on time. That is a grant after you have complied. You still register, still invoice, still file. If you skip GST thinking “the state will exempt us,” you usually get neither the reimbursement nor a clean GSTIN.

How a typical DPIIT SaaS / services startup should think

  1. If you sell only intra-state services and stay under ₹20 lakh (₹10 lakh in special-category states) and none of Section 24 applies, you may stay unregistered — but enterprise customers will push you to get a GSTIN.
  2. The day you take a GSTIN, start charging GST on taxable domestic B2B and B2C (unless a specific exemption applies). Issue tax invoices with HSN/SAC.
  3. Do not opt composition. Composition blocks tax credit and is a poor fit for interstate work, marketplace work, and B2B buyers who want ITC. Phyntara will only let a composition company issue a bill of supply.
  4. Export of services (foreign customer, foreign exchange, and the other place-of-supply tests): generally zero-rated. File a LUT (Letter of Undertaking) on the portal so you need not pay IGST on export invoices, then claim refund of accumulated credit where eligible — or pay IGST and refund. This is CA territory; capture the bills in Phyntara so the pack is not a WhatsApp zip.
  5. AWS, Google Cloud, GitHub, Figma, WeWork / office rent, legal retainers: take tax invoices in the company’s GSTIN. That is your credit. An unregistered founder’s personal card with no GST invoice is usually lost credit.
  6. Founder salary is not a GST supply (employment is outside GST). ESOP / share subscription is not how you “pay GST on funding.” Convertible notes and SAFE-like instruments need a CA, not a GST rate guess.
  7. If you sell through an Indian app store or marketplace that is an e-commerce operator, compulsory registration can apply even when you are tiny.
  8. If AATO in any year from 2017–18 has crossed ₹5 crore, e-invoice (IRN) is generally mandatory for B2B. Turn the flag on in Letterhead and connect IRP. A PDF without IRN is not a valid B2B tax invoice for that GSTIN.

Goods startups (D2C, hardware, food processing)

  • Inter-state goods: register before the first interstate invoice, even if turnover is ₹2 lakh.
  • E-way: if you move goods and the consignment is at or above the notified value (Phyntara uses ₹50,000 for the e-way prompt on tax invoices), generate e-way. Turn “We move goods” on in Letterhead.
  • Packaged food, cosmetics, and toys have rate and HSN traps. Wrong HSN is not “close enough.”
  • Job-work and contract manufacturing: the principal and the job-worker both have GST chores. Capture both sides’ bills.

What to set in Phyntara on day one

DPIIT company — first hour

  1. 1. Letterhead

    Legal name as on PAN / COI, GSTIN, address with PIN (needed for e-invoice), bank, logo, invoice look.

    Open

  2. 2. Regular, not composition

    Unless your CA has a rare goods-only shop that truly wants composition. Startups almost never do.

  3. 3. E-invoice flag

    On if you already IRN or AATO has crossed ₹5 crore. Off if you are a new GSTIN under that line — you still issue tax invoices.

  4. 4. Pilot lock

    Once you have signed that this GSTIN bills only in Phyntara, lock it so Tally is export-only. Dual invoicing is how 2B never matches.